Tutorials and Interactive examples

We have developed Jupypter notebooks demonstrating how to use python-opentree interactively as part of a python workflow.

Example notebooks

To run these notebooks follow the installation instuctions in https://opentree.readthedocs.io/en/latest/readme.html#installation.

And start the notebook server by running:

jupyter notebook docs/notebooks/

For more information on Jupyter notebooks, see [https://jupyter.org/]

Workshop material

All the notes from a workshop presented in winter 2020 are in http://opentreeoflife.github.io/SSBworkshop/, git repo with code and data at https://github.com/snacktavish/OpenTree_SSB2020.